[{"data":1,"prerenderedAt":958},["ShallowReactive",2],{"navigation":3,"/genomics-platform/getting-started/making-a-data-request":421,"/genomics-platform/getting-started/making-a-data-request-surround":953},[4,19,25,131,197],{"title":5,"_path":6,"children":7,"icon":18},"Overview","/overview",[8,9,12,15],{"title":5,"_path":6},{"title":10,"_path":11},"About our Ecosystem","/overview/ecosystem",{"title":13,"_path":14},"Citing St. Jude Cloud","/overview/citing-stjude-cloud",{"title":16,"_path":17},"Frequently Asked Questions","/overview/faq","sjc-icon:child-logo",{"title":20,"_path":21,"children":22,"icon":24},"CC4K","/cc4k",[23],{"title":5,"_path":21},"sjc-icon:ontology-tree",{"title":26,"_path":27,"children":28,"icon":130},"Genomics Platform","/genomics-platform",[29,49,62,80,99],{"title":30,"_path":31,"children":32},"Getting Started","/genomics-platform/getting-started",[33,35,38,41,44,46],{"title":5,"_path":34},"/genomics-platform/getting-started/overview",{"title":36,"_path":37},"Accounts and Billing","/genomics-platform/getting-started/accounts-and-billing",{"title":39,"_path":40},"Making a Data Request","/genomics-platform/getting-started/making-a-data-request",{"title":42,"_path":43},"Filling Out the DAA","/genomics-platform/getting-started/filling-out-the-daa",{"title":16,"_path":45},"/genomics-platform/getting-started/faq",{"title":47,"_path":48},"Glossary","/genomics-platform/getting-started/glossary",{"title":50,"_path":51,"children":52},"About Our Data","/genomics-platform/about-our-data",[53,56,59],{"title":54,"_path":55},"Data Sets and Data Access Units","/genomics-platform/about-our-data/data-sets-and-data-access-units",{"title":57,"_path":58},"File Formats and Sequencing Information","/genomics-platform/about-our-data/file-formats-and-sequencing-information",{"title":60,"_path":61},"Metadata and Clinical Information","/genomics-platform/about-our-data/metadata-and-clinical-information",{"title":63,"_path":64,"children":65},"Managing Data","/genomics-platform/managing-data",[66,68,71,74,77],{"title":5,"_path":67},"/genomics-platform/managing-data/overview",{"title":69,"_path":70},"Upload/Download Data (Local)","/genomics-platform/managing-data/upload-download-data-local",{"title":72,"_path":73},"Upload/Download Data (Cluster)","/genomics-platform/managing-data/upload-download-data-cluster",{"title":75,"_path":76},"Upload/Download Data (DNAnexus)","/genomics-platform/managing-data/upload-download-data-dnanexus",{"title":78,"_path":79},"Renewing Your DAA","/genomics-platform/managing-data/renewing-your-daa",{"title":81,"_path":82,"children":83},"Analyzing Data","/genomics-platform/analyzing-data",[84,87,90,93,96],{"title":85,"_path":86},"Command Line Interaction","/genomics-platform/analyzing-data/command-line-interaction",{"title":88,"_path":89},"Running Our Workflows","/genomics-platform/analyzing-data/running-our-workflows",{"title":91,"_path":92},"Creating a Cloud Application","/genomics-platform/analyzing-data/creating-a-cloud-app",{"title":94,"_path":95},"Interactive Nodes","/genomics-platform/analyzing-data/interactive-nodes",{"title":97,"_path":98},"Visualizing NGS Data","/genomics-platform/analyzing-data/visualizing-ngs-data",{"title":100,"_path":101,"children":102},"Workflow Guides","/genomics-platform/workflow-guides",[103,106,109,112,115,118,121,124,127],{"title":104,"_path":105},"ChIP-Seq Peak Calling","/genomics-platform/workflow-guides/chipseq",{"title":107,"_path":108},"cis-X","/genomics-platform/workflow-guides/cisx",{"title":110,"_path":111},"MethylationToActivity","/genomics-platform/workflow-guides/methylation-to-activity",{"title":113,"_path":114},"Mutational Signatures","/genomics-platform/workflow-guides/mutational-signatures",{"title":116,"_path":117},"Rapid RNA-Seq","/genomics-platform/workflow-guides/rapid-rnaseq",{"title":119,"_path":120},"RNA-Seq Expression Classification","/genomics-platform/workflow-guides/rnaseq-expression-classification",{"title":122,"_path":123},"SEAseq","/genomics-platform/workflow-guides/seaseq",{"title":125,"_path":126},"SequencErr","/genomics-platform/workflow-guides/sequencerr",{"title":128,"_path":129},"WARDEN Differential Gene Expression","/genomics-platform/workflow-guides/warden","sjc-icon:genomics-platform",{"title":132,"_path":133,"children":134,"icon":196},"PeCan","/pecan",[135,149,156,174,181,190],{"title":5,"_path":136,"children":137},"/pecan/overview",[138,140,143,146],{"title":30,"_path":139},"/pecan/overview/getting-started",{"title":141,"_path":142},"Methods and Data","/pecan/overview/methods-and-data",{"title":144,"_path":145},"Videos","/pecan/overview/videos",{"title":147,"_path":148},"FAQ","/pecan/overview/faq",{"title":150,"_path":151,"children":152},"Cohort Building","/pecan/cohort-building",[153],{"title":154,"_path":155},"Create Custom Cohorts","/pecan/cohort-building/cohort-building",{"title":157,"_path":158,"children":159},"Data Facets","/pecan/data-facets",[160,163,165,168,171],{"title":161,"_path":162},"Variants","/pecan/data-facets/variants",{"title":113,"_path":164},"/pecan/data-facets/mutational-signatures",{"title":166,"_path":167},"Expression","/pecan/data-facets/expression",{"title":169,"_path":170},"Histology","/pecan/data-facets/histology",{"title":172,"_path":173},"Use Cases","/pecan/data-facets/use-cases",{"title":175,"_path":176,"children":177},"Accessibility","/pecan/accessibility",[178],{"title":179,"_path":180},"Keyboard Shortcuts","/pecan/accessibility/keyboard-shortcuts",{"title":182,"_path":183,"children":184},"PeCan PIE","/pecan/pecan-pie",[185,188],{"title":186,"_path":187},"What is PIE","/pecan/pecan-pie/what-is-pie",{"title":147,"_path":189},"/pecan/pecan-pie/faq",{"title":191,"_path":192,"children":193},"Release Notes","/pecan/release-notes",[194],{"title":195,"_path":192},"PeCan Release Notes","sjc-icon:pecan",{"title":198,"_path":199,"children":200,"icon":420},"Visualization Community","/visualization-community",[201,215,246,307,411],{"title":5,"_path":202,"children":203},"/visualization-community/overview",[204,207,210,213],{"title":205,"_path":206},"What is Visualization Community","/visualization-community/overview/what-is-visualization-community",{"title":208,"_path":209},"What are ProteinPaint and GenomePaint","/visualization-community/overview/what-are-proteinpaint-and-genome-paint",{"title":211,"_path":212},"Data Types","/visualization-community/overview/data-types-and-graphs",{"title":147,"_path":214},"/visualization-community/overview/faq",{"title":30,"_path":216,"children":217},"/visualization-community/getting-started",[218,220,223,226,229,232,235,238,241,243],{"title":5,"_path":219},"/visualization-community/getting-started/overview",{"title":221,"_path":222},"How to Sign-in","/visualization-community/getting-started/how-to-sign-in",{"title":224,"_path":225},"How to Use the VisEditor","/visualization-community/getting-started/how-to-use-the-viseditor",{"title":227,"_path":228},"Tracks and Apps","/visualization-community/getting-started/tracks-and-apps",{"title":230,"_path":231},"Manage Your Data","/visualization-community/getting-started/manage-your-data",{"title":233,"_path":234},"Collections & Communities","/visualization-community/getting-started/collections-and-communities",{"title":236,"_path":237},"Public vs. Private Visualizations","/visualization-community/getting-started/public-vs-private-visualizations",{"title":239,"_path":240},"Embedding","/visualization-community/getting-started/embedding",{"title":144,"_path":242},"/visualization-community/getting-started/videos",{"title":244,"_path":245},"NEW Data Download","/visualization-community/getting-started/new-data-download",{"title":247,"_path":248,"children":249},"Code Block Library","/visualization-community/code-block-library",[250,253,256,259,262,265,268,271,274,277,280,283,286,289,292,295,298,301,304],{"title":251,"_path":252},"Code Block Basics","/visualization-community/code-block-library/code-block-basics",{"title":254,"_path":255},"Allelic Imbalance","/visualization-community/code-block-library/allelic-imbalance",{"title":257,"_path":258},"Arc","/visualization-community/code-block-library/arc",{"title":260,"_path":261},"BAM","/visualization-community/code-block-library/bam",{"title":263,"_path":264},"BigWig","/visualization-community/code-block-library/bigwig",{"title":266,"_path":267},"BigWig Stranded","/visualization-community/code-block-library/bigwig-stranded",{"title":269,"_path":270},"Expression Rank","/visualization-community/code-block-library/expression-rank",{"title":272,"_path":273},"Hi-C","/visualization-community/code-block-library/hi-c",{"title":275,"_path":276},"Heatmap","/visualization-community/code-block-library/heatmap",{"title":278,"_path":279},"JSON BED","/visualization-community/code-block-library/json-bed",{"title":281,"_path":282},"Lollipop","/visualization-community/code-block-library/lollipop",{"title":284,"_path":285},"MA Volcano","/visualization-community/code-block-library/ma-volcano",{"title":287,"_path":288},"Profile Gene Value","/visualization-community/code-block-library/profile-gene-value",{"title":290,"_path":291},"RNA Splice Junction","/visualization-community/code-block-library/rna-splice-junction",{"title":293,"_path":294},"Single Cell","/visualization-community/code-block-library/single-cell",{"title":296,"_path":297},"Splice Junctions Cohort","/visualization-community/code-block-library/splice-junctions-cohort",{"title":299,"_path":300},"Track List and Facet Table","/visualization-community/code-block-library/track-list-and-facet-table",{"title":302,"_path":303},"t-SNE","/visualization-community/code-block-library/t-sne",{"title":305,"_path":306},"VCF","/visualization-community/code-block-library/vcf",{"title":308,"_path":309,"children":310},"ProteinPaint","/visualization-community/proteinpaint",[311,313,316,318,321,324,327,330,333,336,339,342,345,348,351,354,357,360,363,366,369,372,375,378,381,384,387,390,393,396,399,402,405,408],{"title":308,"_path":312},"/visualization-community/proteinpaint/proteinpaint",{"title":314,"_path":315},"Introduction","/visualization-community/proteinpaint/introduction",{"title":30,"_path":317},"/visualization-community/proteinpaint/getting-started",{"title":319,"_path":320},"Loading Datasets","/visualization-community/proteinpaint/loading-datasets",{"title":322,"_path":323},"Viewing SNV/Indel Mutations","/visualization-community/proteinpaint/viewing-snv-indel-mutations",{"title":325,"_path":326},"Viewing Gene Fusions","/visualization-community/proteinpaint/viewing-gene-fusions",{"title":328,"_path":329},"Viewing Expression Data","/visualization-community/proteinpaint/viewing-expression-data",{"title":331,"_path":332},"Filtering Mutations","/visualization-community/proteinpaint/filtering-mutations",{"title":334,"_path":335},"Exporting Figures and Data","/visualization-community/proteinpaint/exporting-figures-and-data",{"title":337,"_path":338},"Using the Gene Table","/visualization-community/proteinpaint/using-the-gene-table",{"title":340,"_path":341},"Using the Sample Table","/visualization-community/proteinpaint/using-the-sample-table",{"title":343,"_path":344},"Using the Heatmap","/visualization-community/proteinpaint/using-the-heatmap",{"title":346,"_path":347},"Using Disease Pie Charts","/visualization-community/proteinpaint/using-disease-pie-charts",{"title":349,"_path":350},"Stratifying Mutations by Cancer Subtype","/visualization-community/proteinpaint/stratifying-mutations-by-cancer-subtype",{"title":352,"_path":353},"SNV and Indel","/visualization-community/proteinpaint/snv-and-indel",{"title":355,"_path":356},"SV and fusion transcript","/visualization-community/proteinpaint/sv-and-fusion-transcript",{"title":358,"_path":359},"Copy Number Variants","/visualization-community/proteinpaint/copy-number-variants",{"title":361,"_path":362},"Internal tandem duplications","/visualization-community/proteinpaint/internal-tandem-duplications",{"title":364,"_path":365},"Intragenic deletion","/visualization-community/proteinpaint/intragenic-deletion",{"title":367,"_path":368},"Truncation, N-loss, or C-loss","/visualization-community/proteinpaint/truncation",{"title":370,"_path":371},"JSON-BED","/visualization-community/proteinpaint/json-bed",{"title":373,"_path":374},"Splice Junction","/visualization-community/proteinpaint/splice-junction",{"title":376,"_path":377},"Profile-Gene-Value","/visualization-community/proteinpaint/profile-gene-value",{"title":379,"_path":380},"Bampile","/visualization-community/proteinpaint/bampile",{"title":382,"_path":383},"Add Custom Protein Domains","/visualization-community/proteinpaint/add-custom-protein-domains",{"title":385,"_path":386},"Using Custom Tracks","/visualization-community/proteinpaint/using-custom-tracks",{"title":388,"_path":389},"Visualize Your Mutation Data","/visualization-community/proteinpaint/visualize-your-mutation-data",{"title":391,"_path":392},"Loading SNV/Indel Mutations from a File","/visualization-community/proteinpaint/loading-mutations-from-file",{"title":394,"_path":395},"Uploaded Mutation Data User Interface","/visualization-community/proteinpaint/uploaded-mutation-data",{"title":397,"_path":398},"Loading a TCGA MAF File","/visualization-community/proteinpaint/loading-tcga-maf-file",{"title":400,"_path":401},"Using a VCF File","/visualization-community/proteinpaint/using-vcf-file",{"title":403,"_path":404},"Embedding ProteinPaint","/visualization-community/proteinpaint/embedding-proteinpaint",{"title":406,"_path":407},"URL Parameters","/visualization-community/proteinpaint/url-parameters",{"title":409,"_path":410},"Organizing Data into a Study View","/visualization-community/proteinpaint/study-view",{"title":412,"_path":413,"children":414},"GenomePaint","/visualization-community/genomepaint",[415,417],{"title":412,"_path":416},"/visualization-community/genomepaint/genomepaint",{"title":418,"_path":419},"GenomePaint User Guide","/visualization-community/genomepaint/genomepaint-user-guide","sjc-icon:viz",{"_path":40,"_dir":422,"_draft":423,"_partial":423,"_locale":424,"title":39,"description":425,"body":426,"_type":947,"_id":948,"_source":949,"_file":950,"_stem":951,"_extension":952},"getting-started",false,"","How to request data access",{"type":427,"children":428,"toc":934},"root",[429,438,472,483,511,518,576,582,591,605,618,655,668,674,679,684,714,720,725,755,796,802,819,846,877,890,907,913],{"type":430,"tag":431,"props":432,"children":434},"element","h2",{"id":433},"request-process-overview",[435],{"type":436,"value":437},"text","Request Process Overview",{"type":430,"tag":439,"props":440,"children":441},"p",{},[442,444,450,452,461,463,470],{"type":436,"value":443},"Creating a data request is the premier way to access raw St. Jude next generation sequencing data in the cloud.\nYou can get a ",{"type":430,"tag":445,"props":446,"children":447},"strong",{},[448],{"type":436,"value":449},"free",{"type":436,"value":451}," copy of the data in a secure cloud environment powered by ",{"type":430,"tag":453,"props":454,"children":458},"a",{"href":455,"rel":456},"https://azure.microsoft.com/en-us/",[457],"nofollow",[459],{"type":436,"value":460},"Microsoft Azure",{"type":436,"value":462}," and ",{"type":430,"tag":453,"props":464,"children":467},{"href":465,"rel":466},"https://www.dnanexus.com/",[457],[468],{"type":436,"value":469},"DNAnexus",{"type":436,"value":471},", or you can elect to download the data to your local computing environment.",{"type":430,"tag":473,"props":474,"children":482},"iframe",{"width":475,"height":476,"src":477,"title":478,"frameBorder":479,"allow":480,"allowFullScreen":481},560,315,"https://www.youtube.com/embed/i9bJJ5uA_fY","YouTube video player","0","accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture",true,[],{"type":430,"tag":484,"props":485,"children":488},"callout",{"color":486,"icon":487},"orange","i-heroicons-exclamation-circle",[489],{"type":430,"tag":439,"props":490,"children":491},{},[492,497,501,503,509],{"type":430,"tag":445,"props":493,"children":494},{},[495],{"type":436,"value":496},"For-Profit Companies",{"type":430,"tag":498,"props":499,"children":500},"br",{},[],{"type":436,"value":502},"\nSt. Jude Cloud does not allow for-profit companies to access any restricted access genomics data.\nWe are actively working with our institution to assess the feasibility of providing data to for-profit entities.\nIf you work for a for-profit company and would like to be notified if this restriction changes, feel free to email us at ",{"type":430,"tag":453,"props":504,"children":506},{"href":505},"mailto:support@stjude.cloud",[507],{"type":436,"value":508},"support@stjude.cloud",{"type":436,"value":510},".",{"type":430,"tag":512,"props":513,"children":515},"h3",{"id":514},"helpful-things-to-remember",[516],{"type":436,"value":517},"Helpful Things to Remember",{"type":430,"tag":519,"props":520,"children":521},"ol",{},[522,536,549,562],{"type":430,"tag":523,"props":524,"children":525},"li",{},[526,528,534],{"type":436,"value":527},"Data in St. Jude Cloud is grouped into ",{"type":430,"tag":453,"props":529,"children":531},{"href":530},"/genomics-platform/getting-started/glossary#data-access-unit",[532],{"type":436,"value":533},"Data Access Units (DAUs)",{"type":436,"value":535},", which usually correspond to large-scale sequencing initiatives at St. Jude.",{"type":430,"tag":523,"props":537,"children":538},{},[539,541,547],{"type":436,"value":540},"Individuals can ",{"type":430,"tag":453,"props":542,"children":544},{"href":543},"/genomics-platform/getting-started/glossary#data-access-agreement",[545],{"type":436,"value":546},"apply for access",{"type":436,"value":548}," to DAUs on a case-by-case basis for a specific amount of time (1 year, with the opportunity to extend access).",{"type":430,"tag":523,"props":550,"children":551},{},[552,554,560],{"type":436,"value":553},"Access to data in a given DAU is assessed by the corresponding ",{"type":430,"tag":453,"props":555,"children":557},{"href":556},"/genomics-platform/getting-started/glossary#data-access-committee",[558],{"type":436,"value":559},"Data Access Committee",{"type":436,"value":561}," who reviews a variety of factors to grant access.",{"type":430,"tag":523,"props":563,"children":564},{},[565,567,574],{"type":436,"value":566},"There are a number of terms of use and restrictions outlined in the ",{"type":430,"tag":453,"props":568,"children":571},{"href":569,"rel":570},"https://platform.stjude.cloud/api/v1/data_access_agreements/",[457],[572],{"type":436,"value":573},"Data Access Agreement",{"type":436,"value":575},".\nEveryone who will be working with the data must understand and agree to these terms.",{"type":430,"tag":431,"props":577,"children":579},{"id":578},"selecting-data",[580],{"type":436,"value":581},"Selecting Data",{"type":430,"tag":439,"props":583,"children":584},{},[585],{"type":430,"tag":586,"props":587,"children":590},"img",{"alt":588,"src":589},"databrowser guide","/img/genomics-platform/getting-started/making-a-data-request/databrowser-guide.png",[],{"type":430,"tag":439,"props":592,"children":593},{},[594,596,603],{"type":436,"value":595},"The primary way to make your data selection is through our ",{"type":430,"tag":453,"props":597,"children":600},{"href":598,"rel":599},"https://platform.stjude.cloud/data/diseases/paired-tumor-normal",[457],[601],{"type":436,"value":602},"Genomics Platform Data Browser",{"type":436,"value":604},".\nYou can search our raw genomic data by diagnosis, publication, study, or individual samples by selecting a tab along the top.\nYou may further refine your search by applying filters from three categories: Sequencing Type, Sample Type, and File Type.\nPlease note that applying multiple filters within the same category filters using 'OR' logic, while applying multiple filters across different categories filters using 'AND' logic.\nFor example in the overview image above, we have filtered the browser to only show data that is (either WGS OR WES) AND (Diagnosis OR Relapse) AND BAM.",{"type":430,"tag":439,"props":606,"children":607},{},[608,610,616],{"type":436,"value":609},"As you filter and make selections, the data summary panel in the upper left hand corner will update dynamically to give you important descriptive information about the set of data you have selected.\nClick on an empty box to make a selection; when selected, the box will turn blue with a white check mark\nOnce you have completed your data selection, click on ",{"type":430,"tag":611,"props":612,"children":613},"em",{},[614],{"type":436,"value":615},"Request Data",{"type":436,"value":617}," to submit your request and proceed.",{"type":430,"tag":484,"props":619,"children":622},{"color":620,"icon":621},"blue","i-heroicons-document-text-solid",[623],{"type":430,"tag":439,"props":624,"children":625},{},[626,631,634,636,641,643,648,650,654],{"type":430,"tag":445,"props":627,"children":628},{},[629],{"type":436,"value":630},"Note",{"type":430,"tag":498,"props":632,"children":633},{},[],{"type":436,"value":635},"\nYou must have ",{"type":430,"tag":453,"props":637,"children":638},{"href":37},[639],{"type":436,"value":640},"created an account",{"type":436,"value":642}," and be logged in to submit a data request.\nIf you have not yet created an account or you are not logged in, the submit button will say ",{"type":430,"tag":611,"props":644,"children":645},{},[646],{"type":436,"value":647},"Log In",{"type":436,"value":649}," rather than ",{"type":430,"tag":611,"props":651,"children":652},{},[653],{"type":436,"value":615},{"type":436,"value":510},{"type":430,"tag":439,"props":656,"children":657},{},[658,660,666],{"type":436,"value":659},"Alternatively, you may be directed to the Genomics Platform Data Browser through another App to request specific samples.\nThe ",{"type":430,"tag":453,"props":661,"children":663},{"href":662},"/pecan/overview/getting-started#sunburst",[664],{"type":436,"value":665},"PeCan homepage",{"type":436,"value":667}," is one such app that allows you to select data through an interactive visualization.",{"type":430,"tag":431,"props":669,"children":671},{"id":670},"selecting-a-project-or-creating-a-new-one",[672],{"type":436,"value":673},"Selecting a Project or Creating a New One",{"type":430,"tag":439,"props":675,"children":676},{},[677],{"type":436,"value":678},"Now that you have selected your data, you need to choose whether to vend this data into an existing St. Jude Cloud project on DNAnexus, or to create a new St. Jude Cloud project.\nOn the \"Choose Your Data Destination\" step, select to use an existing project and then which specific project you want to add data to, or select to create a new project.",{"type":430,"tag":439,"props":680,"children":681},{},[682],{"type":436,"value":683},"On the \"Name Your Project\" step, you will see the name of the existing project you selected or a blank space to add a name for a new project.\nIn either case, you also need to name a folder within the project.\nThe text box will be prefilled with \"Data Requested (date)\", but you are able to change it here, and also can edit any names after you have created your project.",{"type":430,"tag":484,"props":685,"children":686},{"color":620,"icon":621},[687,695],{"type":430,"tag":439,"props":688,"children":689},{},[690],{"type":430,"tag":445,"props":691,"children":692},{},[693],{"type":436,"value":694},"Important Information About Vending To Existing Projects",{"type":430,"tag":696,"props":697,"children":698},"ul",{},[699,704,709],{"type":430,"tag":523,"props":700,"children":701},{},[702],{"type":436,"value":703},"Within a project, if you use the name of an existing folder, the new data will be added to that folder, a duplicate named folder will not be created.",{"type":430,"tag":523,"props":705,"children":706},{},[707],{"type":436,"value":708},"Selected files already in the project will not be added again - there can't be duplicate files within a project, even in different folders.",{"type":430,"tag":523,"props":710,"children":711},{},[712],{"type":436,"value":713},"If you delete files from your project/folder, and then those files are included in a future selection, they will once again be added.",{"type":430,"tag":512,"props":715,"children":717},{"id":716},"example-use-case",[718],{"type":436,"value":719},"Example Use Case",{"type":430,"tag":439,"props":721,"children":722},{},[723],{"type":436,"value":724},"Let's quickly look at our Real-Time Clinical Genomics (RTCG) dataset as an example of how projects, folders, and files function together.",{"type":430,"tag":439,"props":726,"children":727},{},[728,730,735,737,742,744,748,750,754],{"type":436,"value":729},"The first time you request access to RTCG from the Studies Tab of the Data Browser, you will name your new project.\nFor this example, we'll refer to it as ",{"type":430,"tag":445,"props":731,"children":732},{},[733],{"type":436,"value":734},"RTCG Data Project",{"type":436,"value":736},".\nThen you'll name the folder for this initial selection of data.\nToday's date will autofill, but we'll refer to the folder as ",{"type":430,"tag":445,"props":738,"children":739},{},[740],{"type":436,"value":741},"Initial Request Folder",{"type":436,"value":743}," instead.\nAfter that, complete the DAA and the rest of the process.\nOnce you are approved, the data is delivered within your ",{"type":430,"tag":445,"props":745,"children":746},{},[747],{"type":436,"value":741},{"type":436,"value":749}," folder inside of ",{"type":430,"tag":445,"props":751,"children":752},{},[753],{"type":436,"value":734},{"type":436,"value":510},{"type":430,"tag":439,"props":756,"children":757},{},[758,760,764,766,771,773,777,779,783,785,789,791,795],{"type":436,"value":759},"The RTCG dataset is continuously updated with more Clinical Genomics data from St. Jude.\nWhen you receive an email about the latest release to the dataset, you return to the Data Browser and once again select RTCG from the Studies Tab.\nWhile you request the data, rather than create a new project, you can choose to vend data to an existing project and select ",{"type":430,"tag":445,"props":761,"children":762},{},[763],{"type":436,"value":734},{"type":436,"value":765}," from the dropdown menu.\nNow you may name a new folder to vend to.\nWe'll call this one ",{"type":430,"tag":445,"props":767,"children":768},{},[769],{"type":436,"value":770},"New Release Folder",{"type":436,"value":772}," and submit the request.\nSince you already have access, there is no need to complete a new DAA or collect any signatures.\nThere will now be two folders within your ",{"type":430,"tag":445,"props":774,"children":775},{},[776],{"type":436,"value":734},{"type":436,"value":778}," with the ",{"type":430,"tag":445,"props":780,"children":781},{},[782],{"type":436,"value":741},{"type":436,"value":784}," having most of the data, while ",{"type":430,"tag":445,"props":786,"children":787},{},[788],{"type":436,"value":770},{"type":436,"value":790}," only has the new files that have been released since the first request was made.\nTherefore, the new files are not found in ",{"type":430,"tag":445,"props":792,"children":793},{},[794],{"type":436,"value":741},{"type":436,"value":510},{"type":430,"tag":431,"props":797,"children":799},{"id":798},"completing-the-data-access-agreement",[800],{"type":436,"value":801},"Completing the Data Access Agreement",{"type":430,"tag":484,"props":803,"children":805},{"color":804,"icon":487},"green",[806],{"type":430,"tag":439,"props":807,"children":808},{},[809,814,817],{"type":430,"tag":445,"props":810,"children":811},{},[812],{"type":436,"value":813},"Info",{"type":430,"tag":498,"props":815,"children":816},{},[],{"type":436,"value":818},"\nIf you already have access to the data or are requesting open-access data, you will not be prompted to go through this section.",{"type":430,"tag":439,"props":820,"children":821},{},[822,824,829,831,838,840,845],{"type":436,"value":823},"Through the Electronic Data Access Agreement wizard, you will add all of the necessary information needed for the ",{"type":430,"tag":453,"props":825,"children":826},{"href":543},[827],{"type":436,"value":828},"Data Access Agreement (DAA)",{"type":436,"value":830},".\nOnce you have completed the setup wizard, if you are located in the United States of America, you can opt in to using DocuSign to collect the required signatures - the form will be sent to you and necessary signatories through email via ",{"type":430,"tag":453,"props":832,"children":835},{"href":833,"rel":834},"https://www.docusign.com",[457],[836],{"type":436,"value":837},"DocuSign",{"type":436,"value":839},".\nIf you are not located in the USA, or would like to complete the form manually, you will print the DAA and collect signatures manually, then upload and submit the request.\nYou can learn more about ",{"type":430,"tag":453,"props":841,"children":842},{"href":43},[843],{"type":436,"value":844},"Filling Out The Data Access Agreement here",{"type":436,"value":510},{"type":430,"tag":484,"props":847,"children":848},{"color":804,"icon":487},[849],{"type":430,"tag":439,"props":850,"children":851},{},[852,857,860,862,868,870,875],{"type":430,"tag":445,"props":853,"children":854},{},[855],{"type":436,"value":856},"Planning To Download?",{"type":430,"tag":498,"props":858,"children":859},{},[],{"type":436,"value":861},"\nIf you would like to download the data to local storage, there are extra steps you'll need to follow such as ",{"type":430,"tag":453,"props":863,"children":865},{"href":864},"/genomics-platform/getting-started/filling-out-the-daa#additional-applicants",[866],{"type":436,"value":867},"getting additional signatures",{"type":436,"value":869}," on your data access agreement.\nWe recommend that you work with the data in the cloud if it's feasible; the data provided by St. Jude is free, the compute charges are reasonable, and working in the cloud helps to eliminate the long, error-prone download process.\nPorting your tools to be run in the cloud is easy as well.\nWe recommend you follow ",{"type":430,"tag":453,"props":871,"children":872},{"href":92},[873],{"type":436,"value":874},"this guide",{"type":436,"value":876}," to get started.",{"type":430,"tag":439,"props":878,"children":879},{},[880,882,888],{"type":436,"value":881},"Access request approval typically takes less than 2 weeks if your data access agreement is correctly and completely filled out.\nYou will receive automated emails from ",{"type":430,"tag":453,"props":883,"children":885},{"href":884},"mailto:notifications@stjude.cloud",[886],{"type":436,"value":887},"notifications@stjude.cloud",{"type":436,"value":889}," when your request is approved.\nNote that an email for each of the Data Access Units requested is sent, and they are not all approved at once, but rather as soon as each committee grants approval.",{"type":430,"tag":484,"props":891,"children":893},{"color":620,"icon":892},"i-heroicons-light-bulb",[894],{"type":430,"tag":439,"props":895,"children":896},{},[897,902,905],{"type":430,"tag":445,"props":898,"children":899},{},[900],{"type":436,"value":901},"Tip",{"type":430,"tag":498,"props":903,"children":904},{},[],{"type":436,"value":906},"\nIf you receive an email from us that your DAA is incomplete, you may edit your DAA and upload the revised copy using the 'Add a Form' button the on My Dashboard page.",{"type":430,"tag":431,"props":908,"children":910},{"id":909},"managing-your-data-request",[911],{"type":436,"value":912},"Managing your Data Request",{"type":430,"tag":439,"props":914,"children":915},{},[916,918,923,925,932],{"type":436,"value":917},"Go to our ",{"type":430,"tag":453,"props":919,"children":920},{"href":67},[921],{"type":436,"value":922},"Managing Data Overview",{"type":436,"value":924}," documentation page to learn how to check the status of your data request, complete an EDAA draft, upload a revised DAA, and ultimately access your data from your ",{"type":430,"tag":453,"props":926,"children":929},{"href":927,"rel":928},"https://platform.stjude.cloud/requests/manage",[457],[930],{"type":436,"value":931},"My Dashboard",{"type":436,"value":933}," page.",{"title":424,"searchDepth":935,"depth":935,"links":936},2,[937,941,942,945,946],{"id":433,"depth":935,"text":437,"children":938},[939],{"id":514,"depth":940,"text":517},3,{"id":578,"depth":935,"text":581},{"id":670,"depth":935,"text":673,"children":943},[944],{"id":716,"depth":940,"text":719},{"id":798,"depth":935,"text":801},{"id":909,"depth":935,"text":912},"markdown","content:3.genomics-platform:1.getting-started:3.making-a-data-request.md","content","3.genomics-platform/1.getting-started/3.making-a-data-request.md","3.genomics-platform/1.getting-started/3.making-a-data-request","md",[954,956],{"_path":37,"title":36,"description":955},"Information on account creation and billing setup.",{"_path":43,"title":957,"description":424},"Filling Out The Data Access Agreement",1791243632925]